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Links

Useful Software Packages

PARADIM Summer School 2021 Github
Jupyter Notebooks for learning microscopy data processing including EELS, Diffraction and Ptychography

Tomviz
Software for three-dimensional visualization of tomography datasets.

Cornell Spectrum Imager
Software for processing and analysis of hyperspectral data, such as EELS and EDX maps.

Fiji
A program for image analysis, processing and particle counting, written in Java.  Fiji is ImageJ, this software is useful for measuring line profiles and performing FFTs.

Nion Swift
Python-based Imaging and Spectroscopy processing software – written by the folks who wrote the original Digital Micrograph

Hyperspy
Python libraries for spectral and image processing.  Also reading TFS and Gatan file formats.

Microscopy and Spectroscopy Databases

wEELS.net
Web-EELS:Database of EELS fine-structure fingerprints for quick checks of bonding changes with composition

Gatan’s EELS Atlas
EELS spectra for almost all elements in the periodic table

EELS Database
User-submitted compilation of valence and core-loss spectra from Electron Energy Loss Spectroscopy experiments and X-Ray spectra

X-ray Data Booklet
at Lawrence Berkley National Labs.  Binding energies, scattering physics, useful formulae and references.

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